Plant-microbe interactions
Information from the course leader
Welcome to the Plant-Microbe Interactions course!
The course starts on Monday, November 2, 2021 at 9:15 am in the PRIMA room at the Ultuna library. A preliminary course schedule can be found at the SLU course page (BI1354). The course is organized partly in cooperation with the University of Helsinki and the lectures will be given by lecturers from Sweden or Finland via ZOOM. The "discussions of study questions" will be organised as "on-campus" activities. In addition, the course consists of a laboratory practical in a research group, a computer exercise and a literature project. We are looking forward to seeing you soon.
Daniel Hofius, Anders Hafrén, and Anders Kvarnheden Course Organizers
Course evaluation
The course evaluation is now closed
BI1354-20037 - Course evaluation report
Once the evaluation is closed, the course coordinator and student representative have 1 month to draft their comments. The comments will be published in the evaluation report.
Additional course evaluations for BI1354
Academic year 2024/2025
Plant-microbe interactions (BI1354-20051)
2024-11-01 - 2025-01-19
Academic year 2023/2024
Plant-microbe interactions (BI1354-20019)
2023-10-31 - 2024-01-14
Academic year 2022/2023
Plant-microbe interactions (BI1354-20184)
2022-11-01 - 2023-01-15
Academic year 2020/2021
Plant-microbe interactions (BI1354-20020)
2020-11-02 - 2021-01-17
Academic year 2019/2020
Plant-microbe interactions (BI1354-20063)
2019-11-01 - 2020-01-19
Syllabus and other information
Syllabus
BI1354 Plant-microbe interactions, 15.0 Credits
Växt-mikrobinteraktionerSubjects
Biology BiologyEducation cycle
Master’s levelModules
Title | Credits | Code |
---|---|---|
Single module | 15.0 | 0101 |
Advanced study in the main field
Second cycle, has only first-cycle course/s as entry requirementsMaster’s level (A1N)
Grading scale
The grade requirements within the course grading system are set out in specific criteria. These criteria must be available by the course start at the latest.
Language
EnglishPrior knowledge
Knowledge equivalent to 120 credits at basic level including- 90 credits Biology or
- 30 credits Biology + 60 credits Forest Science including 15 credits Chemistry
- 30 credits Biology + 60 credits Horticultural Science including 15 credits Chemistry
- 30 credits Biology + 60 credits Agricultural Science including 15 credits Chemistry
and
- English 6
Objectives
Plants are in contact with a large number of microorganisms, some of which damage the plant while others are beneficial. The course deals with interactions between plants and microbes for both pathogenic and symbiotic interactions. Infection mechanisms, plant defence and ecological consequences are covered. The intention is to explain the mechanisms and interactions all the way down to the molecular level wherever that is possible.
After completing the course the students should be able to:
comprehensively discuss interactions between plants and pathogenic fungi, bacteria and viruses as well as the defence reactions of the host plant (biotic stress)
comprehensively discuss interactions between plants and non-pathogenic/symbiotic bacteria and fungi
create hypotheses for why plants and microbes react in certain ways in pathogenic and symbiotic interactions
demonstrate the ability independently to interpret scientific results to understand regulation and responses in plant-microbe interactions
demonstrate the ability to use knowledge about plant-microbe interactions in the control of plant diseases and to stimulate plant growth
demonstrate insight into the consequences, on population and ecosystem level, of compatible and incompatible interactions
Content
In the course, interactions between plants and microbes are discussed on general and detailed level for both pathogenic and symbiotic interactions. Infection mechanisms, defence of plants, stress responses and a large number of important problems within agriculture, horticulture and forestry are taken up. Examples are brought from ongoing research at SLU and are presented by the researchers themselves. Topics that are covered are:
infection mechanisms; attachment; pathogen effectors; the role of toxins and other compounds; invasion of plant tissue; subversion of host cell biology
establishment of symbiotic relations (mycorrhiza, rhizobium)
interplay of plants with the microbiome and its effect on plant growth and health
resistance mechanisms against attack by plant pathogens (including nematodes) and insects; gene-for-gene interactions; pathogen recognition; induced resistance; non-host resistance
ecological consequences of resistance and susceptibility to pathogens and insect pests at population level
commonalities and differences in defence responses to biotic and abiotic stimuli
The course consists of Lectures, Laboratory practicals (compulsory), Seminars (compulsory), Project work (compulsory), Exercises, Self studies, Examination and evaluation.
Grading form
The grade requirements within the course grading system are set out in specific criteria. These criteria must be available by the course start at the latest.Formats and requirements for examination
The course contains compulsory parts (laboratory practicals, seminars, project work)
Approved written and oral exams, active participation in compulsory seminars and exercises, oral and written presentations of project work.
- If a student has failed an examination, the examiner has the right to issue supplementary assignments. This applies if it is possible and there are grounds to do so.
- The examiner can provide an adapted assessment to students entitled to study support for students with disabilities following a decision by the university. Examiners may also issue an adapted examination or provide an alternative way for the students to take the exam.
- If this syllabus is withdrawn, SLU may introduce transitional provisions for examining students admitted based on this syllabus and who have not yet passed the course.
- For the examination of a degree project (independent project), the examiner may also allow the student to add supplemental information after the deadline for submission. Read more in the Education Planning and Administration Handbook.
Other information
The right to participate in teaching and/or supervision only applies for the course instance the student was admitted to and registered on.
If there are special reasons, students are entitled to participate in components with compulsory attendance when the course is given again. Read more in the Education Planning and Administration Handbook.
Additional information
The course is given in the faculty common master’s programme Plant Biology for Sustainable Production.Responsible department
Department of Plant Biology
Cooperating departments:
Further information
Grading criteria
PLANT-MICROBE INTERACTIONS BI1354, 15 HEC, GRADING CRITERIA
Objectives
After completion of the course the student is expected to be able to:
- comprehensively discuss interactions between plants and pathogenic fungi, bacteria and viruses as well as the defence reactions of the host plant (biotic stress)
- comprehensively discuss interactions between plants and non-pathogenic/symbiotic bacteria and fungi
- create hypotheses for why plants and microbes react in certain ways in pathogenic and symbiotic interactions
- demonstrate the ability independently to interpret scientific results to understand regulation and responses in plant-microbe interactions
- demonstrate the ability to use knowledge about plant-microbe interactions in the control of plant diseases and to stimulate plant growth
- demonstrate insight into the consequences, on population and ecosystem level, of compatible and incompatible interactions
Grade 3
Objectives 1, 2, 3, 6: The student is able to give a general description of interactions between plants and pathogenic or non-pathogenic/symbiotic microbes, including fungi, bacteria and viruses.
Objective 4: The student is able to write a lab report containing interpretation and discussion of scientific results to understand regulation and responses in plant-microbe interactions.
Objective 5: The student is able to use knowledge about plant-microbe interactions in the control of plant disease and to stimulate plant growth.
Grade 4
Objectives 1, 2, 3, 6: The student is able to give a detailed description of interactions between plants and pathogenic or non-pathogenic/symbiotic microbes, including fungi, bacteria and viruses.
Objective 4: The student is able to write a lab report containing interpretation and discussion of scientific results to understand regulation and responses in plant-microbe interactions. The student is able to write the report within a given time frame.
Grade 5
Objectives 1, 2, 3, 6: The student is able to give a detailed description of interactions between plants and pathogenic or non-pathogenic/symbiotic microbes, including fungi, bacteria and viruses, in a way that shows a deeper understanding of the subject.
Objective 4: The student is able to write a lab report with limited supervision containing interpretation and discussion of scientific results to understand regulation and responses in plant-microbe interactions. The student is able to write the report within a given time frame.
To obtain grade 5 in the course, it is required to have:
Grade 5 on objectives 1, 2, 3, 6
Grade 5 on objective 4
Grade 3 on objective 5
To obtain grade 4 in the course, it is required to have:
Grade 4 on objectives 1, 2, 3, 6
Grade 4 on objective 4
Grade 3 on objective 5
To obtain grade 3 (=pass) in the course, it is required to have:
Grade 3 on all objectives.
Main examination forms
Objectives 1, 2, 3, 6: Written exam, exam home correction
Objective 4: Lab reports
Objective 5: Literature report
Litterature list
- Course literature Kommentar: There is no specific book covering all the topics of the course. Each lecturer will recommend 1-2 articles or book chapters as literature. The articles will be available through the SLU library or the CANVAS course homepage.
- Preparatory reading Kommentar: If you have not studied plant pathology previously, we would suggest having a look into the introductory chapters in the book of G.N. Agrios: Plant Pathology, 5th edition, Academic Press, 2005 (pages 1-353). Also, for those lacking a background in molecular genetics, we recommend a general text book such as “Essentials of Genetics” by Klug, Cummings and Spencer, Palladino, 9th edition 2016.
- Literature project Kommentar: The project work will be a literature study on selected topics that are otherwise not sufficiently covered during the course. You will have the possibility to suggest and select the topic.